{"id":19,"date":"2015-08-08T11:21:41","date_gmt":"2015-08-08T16:21:41","guid":{"rendered":"http:\/\/sites.saumag.edu\/aetucker\/?page_id=19"},"modified":"2016-07-19T13:41:31","modified_gmt":"2016-07-19T18:41:31","slug":"publications","status":"publish","type":"page","link":"https:\/\/sites.saumag.edu\/aetucker\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"<p>Keith RN, <span style=\"text-decoration: underline\">Tucker AE<\/span>, Jackson C, Sung W, Lucas-Lledo I, Shrider D, Schaack S, Dudycha JL, Ackerman M, Younge AJ, Shaw JR, Lynch M (2016) <span style=\"color: #000000\"><strong><a style=\"color: #000000\" href=\"http:\/\/genome.cshlp.org\/content\/early\/2015\/10\/30\/gr.191338.115.abstract\">High mutational rates of large-scale duplication and deletion in Daphnia pulex.<\/a><\/strong><\/span> Genome Res. 26:\u00a0<span style=\"font-weight: inherit;font-style: inherit\">60-69.<\/span><\/p>\n<p>Denton JF, Lugo-Martinez J, <span style=\"text-decoration: underline\">Tucker AE<\/span>, Schrider DR, Warren WC, Hahn MW (2014) <strong><span style=\"color: #000000\"><a style=\"color: #000000\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/25474019\" target=\"_blank\">Extensive error in the number of genes inferred from draft genome assemblies.<\/a><\/span><\/strong> PLoS Comput Biol 10(12): e1003998.<\/p>\n<p><span style=\"color: #000000\">Li W, Kuzoff R, Chen KW, <span style=\"text-decoration: underline\">Tucker AE<\/span>, and Lynch M (2014) <strong><a style=\"color: #000000\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/25123113\">Characterization of newly gained introns in <em>Daphnia<\/em> populations.<\/a><\/strong> Genome Biol Evol\u00a06(9):2218-34.<\/span><\/p>\n<p><span style=\"color: #000000\">Mahato S, Morita S, <span style=\"text-decoration: underline\">Tucker AE<\/span>, Liang X, Jackowska M, et al. (2014) <strong><a style=\"color: #000000\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/24991928\">Common transcriptional mechanisms for visual photoreceptor cell differentiation among Pancrustaceans.<\/a><\/strong> PLoS Genet 10(7): e1004484.\u00a0<\/span><\/p>\n<p><span style=\"color: #000000\"><span style=\"text-decoration: underline\">Tucker A<\/span>, Ackerman M, Eads B, Xu, S, Lynch M (2013) <strong><a style=\"color: #000000\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/23959868\">Population-genomic insights into the evolutionary origin and fate of obligately asexual <em>Daphnia pulex<\/em>.<\/a><\/strong> Proc Natl Acad Sci. USA. 110:15740-15745.<\/span><\/p>\n<p><span style=\"color: #000000\">Sung W, <span style=\"text-decoration: underline\">Tucker A<\/span>, Doak TG, Choi J, Thomas WK, Lynch M (2012) <strong><a style=\"color: #000000\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/23129619\">Extraordinary genome stability in the ciliate <em>Paramecium tetraurelia<\/em>.<\/a><\/strong>\u00a0 Proc Natl Acad Sci 109(47):19339-44.<\/span><\/p>\n<p><span style=\"color: #000000\">Colbourne JK, Pfrender ME, Gilbert D, Thomas WK, <span style=\"text-decoration: underline\">Tucker A<\/span> et al. (2011) <strong><a style=\"color: #000000\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/21292972\">The ecoresponsive genome of <em>Daphnia pulex<\/em>.<\/a><\/strong> Science 331: 551-561.<\/span><\/p>\n<p><span style=\"color: #000000\">Walker CW, Van Beneden RJ, Muttray AF, B\u00f6ttger SA, Kelley ML, <span style=\"text-decoration: underline\">Tucker AE<\/span>, Thomas WK (2011) <strong><a style=\"color: #000000\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/21724017\">p53 Superfamily proteins in marine bivalve cancer and stress biology.<\/a><\/strong> Adv Mar Biol 59:1-36.<\/span><\/p>\n<p><span style=\"color: #000000\">Sung W, <span style=\"text-decoration: underline\">Tucker A<\/span>, Bergeron D, Lynch M, and Thomas, WK (2010) <strong><a style=\"color: #000000\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC3017760\/\">Simple sequence repeat variation in the <em>Daphnia pulex<\/em> genome.<\/a><\/strong> BMC Genomics 11: 691.<\/span><\/p>\n<p><span style=\"color: #000000\">Li W*, <span style=\"text-decoration: underline\">Tucker A<\/span>*, Sung W, Thomas WK, and Lynch M (2009) <strong><a style=\"color: #000000\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/19965475\">Extensive, recent intron gains in <em>Daphnia<\/em> populations.<\/a><\/strong> Science 326: 1260-1262.<\/span><\/p>\n<p><span style=\"color: #000000\">Porazinska DL, Giblin-Davis RM, Faller L, Farmerie W, Kanzaki N, Morris K, Powers\u00a0TO,\u00a0<span style=\"text-decoration: underline\">Tucker AE<\/span>, Sung W, and Thomas WK (2009) <strong><a style=\"color: #000000\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/21564930\">Evaluating high-throughput sequencing as a method for metagenomic analysis of nematode diversity.<\/a><\/strong> Molecular Ecology Resources 9(6):1439-50.<\/span><\/p>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Keith RN, Tucker AE, Jackson C, Sung W, Lucas-Lledo I, Shrider D, Schaack S, Dudycha JL, Ackerman M, Younge AJ, Shaw JR, Lynch M (2016) High mutational rates of large-scale duplication and deletion in Daphnia pulex. Genome Res. 26:\u00a060-69. Denton JF, Lugo-Martinez J, Tucker AE, Schrider DR, Warren WC, Hahn MW (2014) Extensive error in [&hellip;]<\/p>\n","protected":false},"author":7,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-19","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/sites.saumag.edu\/aetucker\/wp-json\/wp\/v2\/pages\/19","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/sites.saumag.edu\/aetucker\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sites.saumag.edu\/aetucker\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sites.saumag.edu\/aetucker\/wp-json\/wp\/v2\/users\/7"}],"replies":[{"embeddable":true,"href":"https:\/\/sites.saumag.edu\/aetucker\/wp-json\/wp\/v2\/comments?post=19"}],"version-history":[{"count":24,"href":"https:\/\/sites.saumag.edu\/aetucker\/wp-json\/wp\/v2\/pages\/19\/revisions"}],"predecessor-version":[{"id":184,"href":"https:\/\/sites.saumag.edu\/aetucker\/wp-json\/wp\/v2\/pages\/19\/revisions\/184"}],"wp:attachment":[{"href":"https:\/\/sites.saumag.edu\/aetucker\/wp-json\/wp\/v2\/media?parent=19"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}